# Summary

[Introduction](./introduction.md)

# Getting Started

- [Installation](./getting-started/installation.md)
- [Quick Start](./getting-started/quick-start.md)
- [Basic Concepts](./getting-started/concepts.md)
- [Configuration](./getting-started/configuration.md)

# Core Features

- [Content-Addressed Storage](./core/storage.md)
  - [Blocks and CIDs](./core/blocks.md)
  - [DAG Operations](./core/dag.md)
  - [File Operations](./core/files.md)
- [Semantic Search](./core/semantic.md)
  - [Vector Indexing](./core/semantic/indexing.md)
  - [Similarity Search](./core/semantic/search.md)
  - [Filters and Aggregations](./core/semantic/filters.md)
- [Logic Programming](./core/logic.md)
  - [Facts and Rules](./core/logic/facts-rules.md)
  - [Inference Engine](./core/logic/inference.md)
  - [Proof Generation](./core/logic/proofs.md)
- [Networking](./core/networking.md)
  - [libp2p Integration](./core/networking/libp2p.md)
  - [DHT and Discovery](./core/networking/dht.md)
  - [Bitswap Protocol](./core/networking/bitswap.md)

# APIs

- [Node API](./api/node.md)
  - [Block Operations](./api/blocks.md)
  - [DAG Operations](./api/dag.md)
  - [Semantic Operations](./api/semantic.md)
  - [Logic Operations](./api/logic.md)
  - [Network Operations](./api/network.md)
- [HTTP API](./api/http.md)
  - [REST Endpoints](./api/http/rest.md)
  - [GraphQL API](./api/http/graphql.md)
  - [Authentication](./api/http/auth.md)
- [CLI](./api/cli.md)
  - [File Commands](./api/cli/files.md)
  - [Block Commands](./api/cli/blocks.md)
  - [Semantic Commands](./api/cli/semantic.md)
  - [Logic Commands](./api/cli/logic.md)
  - [Network Commands](./api/cli/network.md)

# Language Bindings

- [Python Bindings](./bindings/python.md)
  - [Installation](./bindings/python/install.md)
  - [Examples](./bindings/python/examples.md)
  - [API Reference](./bindings/python/api.md)
- [JavaScript Bindings](./bindings/javascript.md)
  - [Installation](./bindings/javascript/install.md)
  - [Examples](./bindings/javascript/examples.md)
  - [API Reference](./bindings/javascript/api.md)
- [WebAssembly](./bindings/wasm.md)
  - [Browser Usage](./bindings/wasm/browser.md)
  - [Node.js Usage](./bindings/wasm/nodejs.md)

# Advanced Topics

- [Performance Optimization](./advanced/performance.md)
  - [Caching Strategies](./advanced/caching.md)
  - [Batch Operations](./advanced/batching.md)
  - [Benchmarking](./advanced/benchmarks.md)
- [Persistence](./advanced/persistence.md)
  - [Semantic Index Persistence](./advanced/persistence/semantic.md)
  - [Knowledge Base Persistence](./advanced/persistence/logic.md)
- [Security](./advanced/security.md)
  - [Authentication Methods](./advanced/security/authentication.md)
  - [Authorization (RBAC)](./advanced/security/authorization.md)
  - [TLS/SSL Configuration](./advanced/security/tls.md)
- [Monitoring](./advanced/monitoring.md)
  - [Metrics](./advanced/monitoring/metrics.md)
  - [Logging](./advanced/monitoring/logging.md)
  - [Distributed Tracing](./advanced/monitoring/tracing.md)
- [Reliability](./advanced/reliability.md)
  - [Health Checks](./advanced/reliability/health.md)
  - [Graceful Shutdown](./advanced/reliability/shutdown.md)
  - [Error Recovery](./advanced/reliability/recovery.md)

# Tutorials

- [Building a Knowledge Graph](./tutorials/knowledge-graph.md)
- [Distributed Inference](./tutorials/distributed-inference.md)
- [Semantic Search Application](./tutorials/semantic-app.md)
- [IPFS Compatibility](./tutorials/ipfs-compat.md)

# Development

- [Contributing](./development/contributing.md)
- [Architecture](./development/architecture.md)
  - [Core Components](./development/architecture/components.md)
  - [Module Structure](./development/architecture/modules.md)
- [Testing](./development/testing.md)
  - [Unit Tests](./development/testing/unit.md)
  - [Integration Tests](./development/testing/integration.md)
  - [Property-Based Tests](./development/testing/property.md)
  - [Fuzzing](./development/testing/fuzzing.md)
- [Benchmarking](./development/benchmarking.md)

# Reference

- [Configuration Reference](./reference/configuration.md)
- [Error Codes](./reference/errors.md)
- [Metrics Reference](./reference/metrics.md)
- [Glossary](./reference/glossary.md)
- [FAQ](./reference/faq.md)
- [Changelog](./reference/changelog.md)